Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DU508_05610 | Not Available | Negative | 1322420 - 1325278 | 102845.0 |
| gliding motility lipoprotein gldh | DU508_05615 | Not Available | Negative | 1325454 - 1325945 | 18919.8 |
| hypothetical protein | DU508_05620 | Not Available | Negative | 1325914 - 1327422 | 56113.6 |
| hypothetical protein | DU508_05625 | Not Available | Negative | 1327425 - 1328573 | 43198.1 |
| tonb-dependent receptor | DU508_05630 | Not Available | Positive | 1329137 - 1331557 | 89626.9 |
| holliday junction resolvase ruvx | DU508_05635 | Not Available | Positive | 1331647 - 1332063 | 15634.9 |
| o-methyltransferase | DU508_05640 | Not Available | Positive | 1332072 - 1332707 | 24124.2 |
| lysm peptidoglycan-binding domain-containing protein | DU508_05645 | Not Available | Positive | 1332953 - 1333621 | 25472.2 |
| lysm peptidoglycan-binding domain-containing protein | DU508_05650 | Not Available | Positive | 1333728 - 1334570 | 32252.1 |
| hypothetical protein | DU508_05655 | Not Available | Positive | 1334619 - 1335371 | 28648.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

