Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_05560 | Not Available | Negative | 1305552 - 1306163 | 23421.8 |
| duf1735 domain-containing protein | DU508_05565 | Not Available | Negative | 1306326 - 1307204 | 31208.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DU508_05570 | Not Available | Negative | 1307216 - 1308910 | 60470.0 |
| susc/raga family tonb-linked outer membrane protein | DU508_05575 | Not Available | Negative | 1308924 - 1311995 | 111107.0 |
| hypothetical protein | DU508_05580 | Not Available | Negative | 1312504 - 1312695 | 7633.28 |
| hypothetical protein | DU508_05585 | Not Available | Negative | 1312892 - 1313182 | 11211.8 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DU508_05590 | Not Available | Negative | 1313246 - 1314754 | 54561.1 |
| susc/raga family tonb-linked outer membrane protein | DU508_05595 | Not Available | Negative | 1314766 - 1317936 | 115450.0 |
| zinc carboxypeptidase | DU508_05600 | Not Available | Negative | 1318138 - 1320630 | 93871.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DU508_05605 | Not Available | Positive | 1320720 - 1322018 | 47858.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

