Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DU508_05460 | Not Available | Negative | 1280404 - 1280673 | 10442.8 |
| site-specific integrase | DU508_05465 | Not Available | Negative | 1280798 - 1282006 | 46352.5 |
| dna-binding protein | DU508_05470 | Not Available | Positive | 1282426 - 1283478 | 40770.7 |
| type ii toxin-antitoxin system death-on-curing family toxin | DU508_05475 | Not Available | Positive | 1283480 - 1283956 | 18114.6 |
| hypothetical protein | DU508_05480 | Not Available | Positive | 1284733 - 1285542 | 30713.6 |
| hypothetical protein | DU508_05485 | Not Available | Positive | 1285555 - 1286430 | 33693.6 |
| hypothetical protein | DU508_05490 | Not Available | Negative | 1286500 - 1289466 | 114194.0 |
| hypothetical protein | DU508_05495 | Not Available | Negative | 1289579 - 1290529 | 36927.9 |
| hypothetical protein | DU508_05500 | Not Available | Positive | 1290691 - 1291020 | 12874.9 |
| hypothetical protein | DU508_05505 | Not Available | Positive | 1290992 - 1291957 | 36417.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

