Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_05410 | Not Available | Negative | 1265927 - 1266229 | 11321.9 |
| glycerophosphodiester phosphodiesterase | DU508_05415 | Not Available | Negative | 1266256 - 1267158 | 34052.6 |
| hypothetical protein | DU508_05420 | Not Available | Negative | 1267338 - 1268036 | 24727.7 |
| s9 family peptidase | DU508_05425 | Not Available | Negative | 1268060 - 1270861 | 106101.0 |
| thioredoxin family protein | DU508_05430 | Not Available | Negative | 1270868 - 1272343 | 56778.5 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_05435 | Not Available | Negative | 1272455 - 1273915 | 54126.7 |
| susc/raga family tonb-linked outer membrane protein | DU508_05440 | Not Available | Negative | 1273922 - 1277371 | 125446.0 |
| fecr family protein | DU508_05445 | Not Available | Negative | 1277486 - 1278637 | 42618.8 |
| rna polymerase sigma-70 factor | DU508_05450 | Not Available | Negative | 1278736 - 1279305 | 22318.4 |
| hypothetical protein | DU508_05455 | Not Available | Negative | 1279515 - 1279739 | 8272.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

