Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DU508_05360 | Not Available | Negative | 1253038 - 1254708 | 64685.9 |
| hypothetical protein | DU508_05365 | Not Available | Positive | 1254689 - 1254895 | 8333.44 |
| pas domain s-box protein | DU508_05370 | Not Available | Negative | 1254930 - 1257377 | 92230.3 |
| hypothetical protein | DU508_05375 | Not Available | Positive | 1257645 - 1259345 | 64109.3 |
| hypothetical protein | DU508_05380 | Not Available | Negative | 1259497 - 1260048 | 21101.1 |
| hypothetical protein | DU508_05385 | Not Available | Negative | 1260014 - 1260694 | 26006.1 |
| hypothetical protein | DU508_05390 | Not Available | Negative | 1261033 - 1261920 | 35868.7 |
| hypothetical protein | DU508_05395 | Not Available | Positive | 1262270 - 1262500 | 8816.79 |
| tetr/acrr family transcriptional regulator | DU508_05400 | Not Available | Negative | 1262533 - 1264275 | 67945.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DU508_05405 | Not Available | Negative | 1264277 - 1265536 | 46811.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

