Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DU508_05310 | Not Available | Negative | 1230055 - 1233117 | 112540.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_05315 | Not Available | Negative | 1233161 - 1234795 | 61817.3 |
| tonb-dependent receptor | DU508_05320 | Not Available | Negative | 1234799 - 1237828 | 112211.0 |
| hybrid sensor histidine kinase/response regulator | DU508_05325 | Not Available | Positive | 1238071 - 1242144 | 154443.0 |
| glycoside hydrolase family 97 protein | DU508_05330 | Not Available | Negative | 1242190 - 1244307 | 80355.6 |
| alpha-amylase | DU508_05335 | Not Available | Negative | 1244361 - 1245743 | 51341.1 |
| susf/suse family outer membrane protein | DU508_05340 | Not Available | Negative | 1245788 - 1246864 | 38528.4 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_05345 | Not Available | Negative | 1246876 - 1248366 | 55302.2 |
| susc/raga family tonb-linked outer membrane protein | DU508_05350 | Not Available | Negative | 1248369 - 1251323 | 106623.0 |
| hypothetical protein | DU508_05355 | Not Available | Positive | 1251721 - 1253037 | 49881.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

