Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | DU508_05160 | Not Available | Positive | 1185357 - 1186715 | 52079.4 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | DU508_05165 | Not Available | Positive | 1186800 - 1188989 | 84111.7 |
| glycoside hydrolase family 15 protein | DU508_05170 | Not Available | Negative | 1189148 - 1190932 | 68523.5 |
| glucose-1-phosphate adenylyltransferase | DU508_05175 | Not Available | Negative | 1191217 - 1192485 | 46918.0 |
| glycogen synthase | DU508_05180 | Not Available | Negative | 1192494 - 1193906 | 53405.1 |
| uroporphyrinogen-iii c-methyltransferase | DU508_05185 | Not Available | Negative | 1194329 - 1195123 | 28693.4 |
| hypothetical protein | DU508_05190 | Not Available | Negative | 1195440 - 1195910 | 17102.6 |
| duf5110 domain-containing protein | DU508_05195 | Not Available | Negative | 1196083 - 1198338 | 86405.0 |
| sulfate adenylyltransferase | DU508_05200 | Not Available | Negative | 1198691 - 1199941 | 46406.2 |
| sulfate adenylyltransferase subunit cysd | DU508_05205 | Not Available | Negative | 1200006 - 1200911 | 34469.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

