Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DU508_05110 | Not Available | Negative | 1172374 - 1174752 | 88742.6 |
| abc transporter permease | DU508_05115 | Not Available | Negative | 1174829 - 1177198 | 88264.1 |
| abc transporter permease | DU508_05120 | Not Available | Negative | 1177272 - 1179623 | 88351.3 |
| abc transporter atp-binding protein | DU508_05125 | Not Available | Negative | 1179841 - 1180539 | 26125.5 |
| hlyd family efflux transporter periplasmic adaptor subunit | DU508_05130 | Not Available | Negative | 1180651 - 1181895 | 46340.5 |
| hypothetical protein | DU508_05135 | Not Available | Positive | 1181935 - 1182132 | 7091.89 |
| hypothetical protein | DU508_05140 | Not Available | Positive | 1182248 - 1182640 | 14822.9 |
| endonuclease domain-containing protein | DU508_05145 | Not Available | Positive | 1182948 - 1183328 | 15095.9 |
| hypothetical protein | DU508_05150 | Not Available | Negative | 1183430 - 1183759 | 12121.9 |
| sigma-54-dependent fis family transcriptional regulator | DU508_05155 | Not Available | Positive | 1183894 - 1185264 | 51518.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

