Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exosortase k | DU508_05010 | Not Available | Positive | 1146125 - 1146655 | 20450.6 |
| msep-cterm sorting domain-containing protein | DU508_05015 | Not Available | Positive | 1146639 - 1149452 | 108086.0 |
| hypothetical protein | DU508_05020 | Not Available | Positive | 1149476 - 1149784 | 11168.3 |
| adp-forming succinate--coa ligase subunit beta | DU508_05025 | Not Available | Positive | 1150100 - 1151293 | 42892.7 |
| rna polymerase sigma factor rpod/siga | DU508_05030 | Not Available | Positive | 1152614 - 1153474 | 32636.0 |
| hypothetical protein | DU508_05035 | Not Available | Positive | 1153569 - 1153892 | 12797.2 |
| atp-binding cassette domain-containing protein | DU508_05040 | Not Available | Positive | 1153874 - 1154533 | 25022.6 |
| amp nucleosidase | DU508_05045 | Not Available | Negative | 1154654 - 1155451 | 29363.8 |
| atp-dependent clp protease atp-binding subunit clpx | DU508_05050 | Not Available | Negative | 1155600 - 1156838 | 46027.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DU508_05055 | Not Available | Negative | 1156822 - 1157529 | 26087.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

