Haloplanus salinus strain JCM 18368

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloplanus

Description

Haloplanus salinus strain JCM 18368 is characterized by its single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in extreme environments. The strain is cataloged under the accession number QPHM00000000.1, which provides a reference for its genomic information. As a member of the Haloplanus genus, Haloplanus salinus is adapted to high-salinity environments, which is a defining trait of this group. The ability to thrive in such extreme conditions suggests a range of biochemical adaptations, including specialized mechanisms for osmoregulation and cellular homeostasis. These adaptations are critical for survival and proliferation in hypersaline habitats, such as salt lakes and saline soda lakes, where osmotic pressure is a significant environmental challenge. The ecological significance of Haloplanus salinus strain JCM 18368 lies in its potential role in biogeochemical cycles within saline ecosystems. Microorganisms like Haloplanus salinus contribute to nutrient cycling and may play a role in the degradation of organic matter, influencing the overall health and sustainability of their environments. Understanding the genomic and phenotypic traits of this strain can provide insights into microbial diversity and functional roles in saline habitats, ultimately enhancing our knowledge of life's resilience in extreme conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloplanus
SpeciesHaloplanus salinus
Strainstrain JCM 18368

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloplanus salinus strain JCM 18368 contig00004, whole genome

Gene Summary

Adenine Count

593734 bp

Thymine Count

605002 bp

Guanine Count

1173350 bp

Cytosine Count

1177012 bp

Genome Length

3549098 bp

Protein-coding Genes

3335 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome bc complex cytochrome b subunitDU504_02240Not AvailablePositive433112 - 43390630444.4
cytochrome bc complex cytochrome b subunitDU504_02245Not AvailablePositive433911 - 43468128810.7
hypothetical proteinDU504_02250Not AvailablePositive434688 - 43507113101.0
hypothetical proteinDU504_02255Not AvailablePositive435064 - 43534210035.3
hypothetical proteinDU504_02260Not AvailableNegative435454 - 43589416141.0
atp-nad kinaseDU504_02265Not AvailableNegative435919 - 43666524523.7
m20/m25/m40 family metallo-hydrolaseDU504_02270Not AvailableNegative436691 - 43799846122.6
thiolase domain-containing proteinDU504_02275Not AvailablePositive438167 - 43933340465.1
zn-ribbon domain-containing ob-fold proteinDU504_02280Not AvailablePositive439330 - 43970413090.2
alpha/beta hydrolaseDU504_02285Not AvailableNegative439685 - 44062333432.1

Displaying genes 461 – 470 of 3423 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.