Haloplanus salinus strain JCM 18368

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloplanus

Description

Haloplanus salinus strain JCM 18368 is characterized by its single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in extreme environments. The strain is cataloged under the accession number QPHM00000000.1, which provides a reference for its genomic information. As a member of the Haloplanus genus, Haloplanus salinus is adapted to high-salinity environments, which is a defining trait of this group. The ability to thrive in such extreme conditions suggests a range of biochemical adaptations, including specialized mechanisms for osmoregulation and cellular homeostasis. These adaptations are critical for survival and proliferation in hypersaline habitats, such as salt lakes and saline soda lakes, where osmotic pressure is a significant environmental challenge. The ecological significance of Haloplanus salinus strain JCM 18368 lies in its potential role in biogeochemical cycles within saline ecosystems. Microorganisms like Haloplanus salinus contribute to nutrient cycling and may play a role in the degradation of organic matter, influencing the overall health and sustainability of their environments. Understanding the genomic and phenotypic traits of this strain can provide insights into microbial diversity and functional roles in saline habitats, ultimately enhancing our knowledge of life's resilience in extreme conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloplanus
SpeciesHaloplanus salinus
Strainstrain JCM 18368

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloplanus salinus strain JCM 18368 contig00004, whole genome

Gene Summary

Adenine Count

593734 bp

Thymine Count

605002 bp

Guanine Count

1173350 bp

Cytosine Count

1177012 bp

Genome Length

3549098 bp

Protein-coding Genes

3335 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDU504_06785Not AvailableNegative1298092 - 129958247220.5
duf58 domain-containing proteinDU504_06790Not AvailableNegative1299579 - 130106051257.9
transglutaminase domain-containing proteinDU504_06795Not AvailableNegative1301530 - 130420592031.6
5-formyltetrahydrofolate cyclo-ligaseDU504_06800Not AvailablePositive1304304 - 130505326816.2
bile acid:sodium symporter family proteinDU504_06805Not AvailablePositive1305169 - 130615233471.2
tigr00341 family proteinDU504_06810Not AvailablePositive1306218 - 130758547783.4
duf541 domain-containing proteinDU504_06815Not AvailablePositive1307619 - 130832923765.8
gtp-binding proteinDU504_06820Not AvailableNegative1308326 - 130933036991.1
duf367 family proteinDU504_06825Not AvailableNegative1309555 - 131004317841.9
patatin-like phospholipase family proteinDU504_06830Not AvailableNegative1310088 - 131118839450.5

Displaying genes 1341 – 1350 of 3423 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.