Haloplanus salinus strain JCM 18368

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloplanus

Description

Haloplanus salinus strain JCM 18368 is characterized by its single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in extreme environments. The strain is cataloged under the accession number QPHM00000000.1, which provides a reference for its genomic information. As a member of the Haloplanus genus, Haloplanus salinus is adapted to high-salinity environments, which is a defining trait of this group. The ability to thrive in such extreme conditions suggests a range of biochemical adaptations, including specialized mechanisms for osmoregulation and cellular homeostasis. These adaptations are critical for survival and proliferation in hypersaline habitats, such as salt lakes and saline soda lakes, where osmotic pressure is a significant environmental challenge. The ecological significance of Haloplanus salinus strain JCM 18368 lies in its potential role in biogeochemical cycles within saline ecosystems. Microorganisms like Haloplanus salinus contribute to nutrient cycling and may play a role in the degradation of organic matter, influencing the overall health and sustainability of their environments. Understanding the genomic and phenotypic traits of this strain can provide insights into microbial diversity and functional roles in saline habitats, ultimately enhancing our knowledge of life's resilience in extreme conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloplanus
SpeciesHaloplanus salinus
Strainstrain JCM 18368

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloplanus salinus strain JCM 18368 contig00004, whole genome

Gene Summary

Adenine Count

593734 bp

Thymine Count

605002 bp

Guanine Count

1173350 bp

Cytosine Count

1177012 bp

Genome Length

3549098 bp

Protein-coding Genes

3335 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
high-affinity nickel-transporter proteinDU504_06210Not AvailablePositive1189099 - 118974920914.8
trna pseudouridine(13) synthase trudDU504_06215Not AvailablePositive1189811 - 119114548511.7
metal-binding proteinDU504_06220Not AvailablePositive1191265 - 119198726086.8
hypothetical proteinDU504_06225Not AvailablePositive1192080 - 119276623032.3
50s ribosomal protein l37aeDU504_06230Not AvailablePositive1192823 - 11930959706.22
dna-directed rna polymerase subunit pDU504_06235Not AvailablePositive1193097 - 11932315133.21
keops complex pcc1-like subunitDU504_06240Not AvailablePositive1193234 - 11935099940.65
prefoldin subunit betaDU504_06245Not AvailablePositive1193588 - 119397714081.1
duf3194 domain-containing proteinDU504_06250Not AvailablePositive1193982 - 11942429013.05
hypothetical proteinDU504_06255Not AvailablePositive1194274 - 11945017676.99

Displaying genes 1231 – 1240 of 3423 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.