Flavobacterium petrolei strain Kopri-42 22

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium petrolei strain Kopri-42 22 is a rod-shaped bacterium notable for its single replicon, which is significant in its genetic organization and replication processes. The presence of flagella indicates that this strain is motile, allowing it to navigate its environment effectively, which could be advantageous in various ecological niches. This strain belongs to the genus Flavobacterium, a group of bacteria typically associated with the degradation of organic compounds, including hydrocarbons. The ability of such bacteria to break down complex substances is critical in bioremediation processes, particularly in environments contaminated with petroleum products. The specific traits of Flavobacterium petrolei strain Kopri-42 22 suggest it may play a role in microbial ecology related to oil degradation. The accession number for Flavobacterium petrolei strain Kopri-42 22 is QNVY00000000.2, which can be used to access its genomic data for further study. Understanding the genetic and metabolic capabilities of this strain may contribute to our knowledge of microbial interactions in oil-rich habitats and their potential applications in environmental cleanup strategies.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium petrolei
Strainstrain Kopri-42 22

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium petrolei strain Kopri-42 22
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium petrolei strain Kopri-42 22, whole genome shotgun

Gene Summary

Adenine Count

1235640 bp

Thymine Count

1223462 bp

Guanine Count

635753 bp

Cytosine Count

643558 bp

Genome Length

3738413 bp

Protein-coding Genes

3181 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyltransferase domain-containing proteinDR871_005520Not AvailableNegative1275010 - 127572027174.9
16s rrna processing protein rimmDR871_005525Not AvailableNegative1275825 - 127634920115.4
30s ribosomal protein s16DR871_005530Not AvailableNegative1276364 - 127692119815.3
hypothetical proteinDR871_005535Not AvailablePositive1277120 - 127759917265.4
rna-binding proteinDR871_005540Not AvailablePositive1277753 - 127811512782.6
3-isopropylmalate dehydrogenaseDR871_005545Not AvailableNegative1278277 - 127933838710.3
2-isopropylmalate synthaseDR871_005550Not AvailableNegative1279372 - 128089856800.8
3-isopropylmalate dehydratase small subunitDR871_005555Not AvailableNegative1281038 - 128163422002.0
3-isopropylmalate dehydratase large subunitDR871_005560Not AvailableNegative1281826 - 128322050034.8
dna polymerase iii subunit alphaDR871_005565Not AvailablePositive1283862 - 1288406171693.0

Displaying genes 1111 – 1120 of 3237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.