Salipiger aestuarii strain DSM 22011

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger aestuarii strain DSM 22011 is a Gram-negative, rod-shaped bacterium. This strain is notable for possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its ecological adaptability. The complete genomic sequence of this strain is available under the accession number QLMG00000000.1, providing a resource for further research into its genetic makeup and potential applications. As a member of the Salipiger genus, strain DSM 22011 is likely involved in biogeochemical processes in its natural habitat, which is typically associated with estuarine environments. The Gram-negative characteristic suggests a specific cell wall structure that may confer advantages such as resistance to certain environmental stresses or antimicrobial agents. The rod shape of this bacterium may enhance its motility and ability to colonize various surfaces in aquatic sediments. The ecological role of Salipiger aestuarii strain DSM 22011 may include participation in nutrient cycling and interactions with other microorganisms in estuarine ecosystems. Understanding its genetic and physiological traits can provide insights into its function in these environments, as well as its potential for biotechnological applications. Further studies are needed to explore its metabolic capabilities and ecological interactions, which could shed light on the significance of this strain in microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger aestuarii
Strainstrain DSM 22011

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger aestuarii strain DSM 22011 Ga0070519_1128, whole genome

Gene Summary

Adenine Count

829962 bp

Thymine Count

832991 bp

Guanine Count

1505747 bp

Cytosine Count

1489882 bp

Genome Length

4658697 bp

Protein-coding Genes

4412 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyldiaminopimelate desuccinylaseATI53_10436Not AvailablePositive3658468 - 365961340443.8
dihydrolipoamide dehydrogenaseATI53_10437Not AvailablePositive3659703 - 366110048485.2
rnase rATI53_10438Not AvailablePositive3661234 - 366357385337.9
putative (di)nucleoside polyphosphate hydrolaseATI53_10439Not AvailableNegative3663580 - 366406218326.7
carboxyl-terminal processing proteaseATI53_104310Not AvailableNegative3664121 - 366546448090.4
septal ring factor envc (amia/amib activator)ATI53_104311Not AvailableNegative3665538 - 366665939171.6
phosphoglycerate mutaseATI53_104312Not AvailableNegative3666656 - 366817353894.2
diaminopimelate decarboxylaseATI53_104313Not AvailablePositive3668318 - 366958345316.5
uncharacterized protein (tigr02302 family)ATI53_104314Not AvailablePositive3669621 - 367217693467.0
dna-binding marr family transcriptional regulatorATI53_104315Not AvailablePositive3672244 - 367312832088.4

Displaying genes 3571 – 3580 of 4521 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.