Salipiger aestuarii strain DSM 22011

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger aestuarii strain DSM 22011 is a Gram-negative, rod-shaped bacterium. This strain is notable for possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its ecological adaptability. The complete genomic sequence of this strain is available under the accession number QLMG00000000.1, providing a resource for further research into its genetic makeup and potential applications. As a member of the Salipiger genus, strain DSM 22011 is likely involved in biogeochemical processes in its natural habitat, which is typically associated with estuarine environments. The Gram-negative characteristic suggests a specific cell wall structure that may confer advantages such as resistance to certain environmental stresses or antimicrobial agents. The rod shape of this bacterium may enhance its motility and ability to colonize various surfaces in aquatic sediments. The ecological role of Salipiger aestuarii strain DSM 22011 may include participation in nutrient cycling and interactions with other microorganisms in estuarine ecosystems. Understanding its genetic and physiological traits can provide insights into its function in these environments, as well as its potential for biotechnological applications. Further studies are needed to explore its metabolic capabilities and ecological interactions, which could shed light on the significance of this strain in microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger aestuarii
Strainstrain DSM 22011

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger aestuarii strain DSM 22011 Ga0070519_1128, whole genome

Gene Summary

Adenine Count

829962 bp

Thymine Count

832991 bp

Guanine Count

1505747 bp

Cytosine Count

1489882 bp

Genome Length

4658697 bp

Protein-coding Genes

4412 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hlyd family secretion proteinATI53_101620Not AvailablePositive2114400 - 211546737784.2
ribosome-dependent atpaseATI53_101621Not AvailablePositive2115464 - 211820599224.7
abc-2 type transport system permease proteinATI53_101622Not AvailablePositive2118209 - 211931239285.8
nucleotide-binding universal stress uspa family proteinATI53_101623Not AvailableNegative2119344 - 211980215993.3
marr family transcriptional regulator for hemolysinATI53_101624Not AvailablePositive2119901 - 212036517339.0
membrane fusion protein (multidrug efflux system)ATI53_101625Not AvailablePositive2120349 - 212151841192.2
emrb/qaca subfamily drug resistance transporterATI53_101626Not AvailablePositive2121505 - 212305554494.7
hypothetical proteinATI53_101627Not AvailableNegative2123174 - 212389925633.0
biotin-dependent enzymeATI53_101628Not AvailableNegative2123896 - 21241328500.13
pyruvate dehydrogenase e1 component beta subunitATI53_101629Not AvailableNegative2124163 - 212517936591.1

Displaying genes 2081 – 2090 of 4521 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.