Salipiger aestuarii strain DSM 22011

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger aestuarii strain DSM 22011 is a Gram-negative, rod-shaped bacterium. This strain is notable for possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its ecological adaptability. The complete genomic sequence of this strain is available under the accession number QLMG00000000.1, providing a resource for further research into its genetic makeup and potential applications. As a member of the Salipiger genus, strain DSM 22011 is likely involved in biogeochemical processes in its natural habitat, which is typically associated with estuarine environments. The Gram-negative characteristic suggests a specific cell wall structure that may confer advantages such as resistance to certain environmental stresses or antimicrobial agents. The rod shape of this bacterium may enhance its motility and ability to colonize various surfaces in aquatic sediments. The ecological role of Salipiger aestuarii strain DSM 22011 may include participation in nutrient cycling and interactions with other microorganisms in estuarine ecosystems. Understanding its genetic and physiological traits can provide insights into its function in these environments, as well as its potential for biotechnological applications. Further studies are needed to explore its metabolic capabilities and ecological interactions, which could shed light on the significance of this strain in microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger aestuarii
Strainstrain DSM 22011

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger aestuarii strain DSM 22011 Ga0070519_1128, whole genome

Gene Summary

Adenine Count

829962 bp

Thymine Count

832991 bp

Guanine Count

1505747 bp

Cytosine Count

1489882 bp

Genome Length

4658697 bp

Protein-coding Genes

4412 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid/amide abc transporter membrane protein 1 (haat family)ATI53_101610Not AvailableNegative2100910 - 210179731086.1
long-chain acyl-coa synthetaseATI53_101611Not AvailableNegative2101798 - 210371770263.6
branched-chain amino acid transport system atp-binding proteinATI53_101612Not AvailableNegative2103710 - 210451629455.2
citronellol/citronellal dehydrogenaseATI53_101613Not AvailableNegative2104555 - 210540930573.1
anti-sigma factor chrr (cupin superfamily)ATI53_101614Not AvailablePositive2105960 - 210662823930.1
monoamine oxidaseATI53_101615Not AvailablePositive2106794 - 210785538653.9
multidrug efflux pump subunit acrbATI53_101616Not AvailableNegative2107920 - 2111000111076.0
rnd family efflux transporter mfp subunitATI53_101617Not AvailableNegative2111032 - 211218040956.1
aromatic ring-opening dioxygenase catalytic subunit (ligb family)ATI53_101618Not AvailablePositive2112804 - 211361629516.1
hypothetical proteinATI53_101619Not AvailablePositive2113645 - 211414217065.1

Displaying genes 2071 – 2080 of 4521 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.