Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity fe/cu permease | LY11_00031 | Not Available | Negative | 33187 - 33651 | 17665.0 |
| signal peptidase ii | LY11_00032 | Not Available | Positive | 33818 - 34312 | 18231.9 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | LY11_00033 | Not Available | Positive | 34322 - 34987 | 24723.8 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LY11_00034 | Not Available | Negative | 35002 - 36270 | 49388.9 |
| chorismate mutase | LY11_00035 | Not Available | Negative | 36260 - 36649 | 14509.8 |
| virulence protein virj | LY11_00036 | Not Available | Negative | 36821 - 37486 | 24892.0 |
| response regulator receiver domain-containing protein | LY11_00037 | Not Available | Positive | 37856 - 38218 | 13823.8 |
| histidine decarboxylase | LY11_00038 | Not Available | Negative | 38193 - 39332 | 42770.3 |
| lrp/asnc family leucine-responsive transcriptional regulator | LY11_00039 | Not Available | Positive | 39500 - 39964 | 17436.5 |
| helix-turn-helix protein | LY11_00040 | Not Available | Positive | 40375 - 40923 | 20939.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

