Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small conductance mechanosensitive channel | LY11_00013 | Not Available | Negative | 11891 - 12715 | 30091.9 |
| type iii secretion system (t3ss) sseb-like protein | LY11_00014 | Not Available | Negative | 12889 - 13599 | 27160.2 |
| superfamily i dna and/or rna helicase | LY11_00015 | Not Available | Negative | 13949 - 15859 | 71133.0 |
| pimeloyl-acp methyl ester carboxylesterase | LY11_00016 | Not Available | Positive | 15943 - 16806 | 32330.6 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 16208 - 16307 | Not Available |
| hypothetical protein | LY11_00017 | Not Available | Negative | 16808 - 17551 | 27176.8 |
| alpha-l-fucosidase | LY11_00018 | Not Available | Positive | 17711 - 19666 | 72356.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_00019 | Not Available | Negative | 19669 - 20262 | 22975.9 |
| uncharacterized protein ydiu (upf0061 family) | LY11_00020 | Not Available | Positive | 20555 - 22111 | 58519.5 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 22925 - 23314 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

