Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-zinc-cadmium efflux system outer membrane protein | LY11_00905 | Not Available | Negative | 996182 - 997492 | 50161.6 |
| signal transduction histidine kinase | LY11_00906 | Not Available | Negative | 997899 - 999254 | 51476.3 |
| dna-binding response ompr family regulator | LY11_00907 | Not Available | Negative | 999278 - 999949 | 25313.3 |
| cic family chloride channel protein | LY11_00908 | Not Available | Negative | 1000175 - 1001965 | 65676.3 |
| 23s rrna pseudouridine955/2504/2580 synthase | LY11_00909 | Not Available | Negative | 1001977 - 1002699 | 27467.3 |
| two-component system alkaline phosphatase synthesis response regulator phop | LY11_00910 | Not Available | Negative | 1002771 - 1003460 | 25975.7 |
| peroxiredoxin | LY11_00911 | Not Available | Negative | 1003566 - 1004672 | 41560.9 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | LY11_00912 | Not Available | Negative | 1004698 - 1006167 | 53971.0 |
| hypothetical protein | LY11_00913 | Not Available | Positive | 1006311 - 1006901 | 22359.7 |
| fur family ferric uptake transcriptional regulator | LY11_00914 | Not Available | Positive | 1007020 - 1007436 | 15579.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

