Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-aspartyl-peptidase (threonine type) | LY11_00885 | Not Available | Negative | 972353 - 973381 | 36336.0 |
| putative outer membrane starch-binding protein | LY11_00886 | Not Available | Negative | 973472 - 974845 | 50907.8 |
| tonb-linked susc/raga family outer membrane protein | LY11_00887 | Not Available | Negative | 974856 - 978221 | 123782.0 |
| fecr family protein | LY11_00888 | Not Available | Negative | 978274 - 979407 | 42856.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_00889 | Not Available | Negative | 979492 - 980043 | 21534.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | LY11_00890 | Not Available | Positive | 980119 - 981018 | 32543.7 |
| surface polysaccharide o-acyltransferase-like enzyme | LY11_00891 | Not Available | Negative | 981113 - 982186 | 41389.6 |
| pimeloyl-acp methyl ester carboxylesterase | LY11_00892 | Not Available | Negative | 982336 - 983205 | 33140.2 |
| dna-binding transcriptional lysr family regulator | LY11_00893 | Not Available | Positive | 983415 - 984278 | 32489.4 |
| hypothetical protein | LY11_00894 | Not Available | Positive | 984287 - 984472 | 7136.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

