Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter cryoconitis strain DSM 14825
Accession NumberQLLR00000000.1
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| low affinity fe/cu permease | LY11_00031 | Not Available | - | 33187 - 33651 | 17665.0 |
| signal peptidase ii | LY11_00032 | Not Available | + | 33818 - 34312 | 18231.9 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | LY11_00033 | Not Available | + | 34322 - 34987 | 24723.8 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LY11_00034 | Not Available | - | 35002 - 36270 | 49388.9 |
| chorismate mutase | LY11_00035 | Not Available | - | 36260 - 36649 | 14509.8 |
| virulence protein virj | LY11_00036 | Not Available | - | 36821 - 37486 | 24892.0 |
| response regulator receiver domain-containing protein | LY11_00037 | Not Available | + | 37856 - 38218 | 13823.8 |
| histidine decarboxylase | LY11_00038 | Not Available | - | 38193 - 39332 | 42770.3 |
| lrp/asnc family leucine-responsive transcriptional regulator | LY11_00039 | Not Available | + | 39500 - 39964 | 17436.5 |
| helix-turn-helix protein | LY11_00040 | Not Available | + | 40375 - 40923 | 20939.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.