Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter cryoconitis strain DSM 14825
Accession NumberQLLR00000000.1
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase | LY11_00021 | Not Available | - | 22120 - 23103 | 36280.7 |
| chromosomal replication initiator protein | LY11_00022 | Not Available | - | 23224 - 24654 | 53748.9 |
| ohr subfamily peroxiredoxin | LY11_00023 | Not Available | - | 25367 - 25792 | 14777.6 |
| dna-binding marr family transcriptional regulator | LY11_00024 | Not Available | - | 25785 - 26213 | 16154.2 |
| enoyl-[acyl-carrier protein] reductase/trans-2-enoyl-coa reductase (nad+) | LY11_00025 | Not Available | - | 26381 - 27571 | 42679.9 |
| dipeptidase d | LY11_00026 | Not Available | - | 27613 - 29073 | 52767.1 |
| pap2 superfamily protein | LY11_00027 | Not Available | - | 29195 - 29815 | 23845.9 |
| pimeloyl-acp methyl ester carboxylesterase | LY11_00028 | Not Available | + | 30000 - 30821 | 30374.6 |
| murein l,d-transpeptidase ycbb/ykud | LY11_00029 | Not Available | + | 30855 - 32489 | 62159.8 |
| ferritin-like metal-binding protein ycie | LY11_00030 | Not Available | + | 32549 - 33121 | 20712.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.