Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system substrate-binding protein | LY11_00713 | Not Available | Negative | 785185 - 785868 | 25595.1 |
| uncharacterized protein (tigr00297 family) | LY11_00714 | Not Available | Negative | 786091 - 786807 | 24911.9 |
| surface antigen-like protein | LY11_00715 | Not Available | Positive | 786880 - 788097 | 46070.5 |
| carboxypeptidase-like protein | LY11_00716 | Not Available | Negative | 788094 - 790655 | 98534.9 |
| helix-turn-helix protein | LY11_00717 | Not Available | Negative | 790907 - 791821 | 35389.3 |
| rnd family efflux transporter mfp subunit | LY11_00718 | Not Available | Negative | 791884 - 793062 | 43109.8 |
| multidrug efflux pump subunit acrb | LY11_00719 | Not Available | Negative | 793049 - 796333 | 119226.0 |
| outer membrane protein tolc | LY11_00720 | Not Available | Negative | 796348 - 797745 | 51301.7 |
| methyltransferase family protein | LY11_00721 | Not Available | Negative | 798036 - 798686 | 24602.9 |
| hypothetical protein | LY11_00722 | Not Available | Negative | 798707 - 799615 | 35006.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

