Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | LY11_00693 | Not Available | Negative | 761801 - 763639 | 68897.1 |
| hypothetical protein | LY11_00694 | Not Available | Negative | 763639 - 764481 | 32106.8 |
| hypothetical protein | LY11_00695 | Not Available | Negative | 764485 - 765018 | 18927.7 |
| nhl repeat-containing protein | LY11_00696 | Not Available | Negative | 765067 - 766257 | 41371.3 |
| susd-like starch-binding protein associating with outer membrane | LY11_00697 | Not Available | Negative | 766300 - 767688 | 51577.2 |
| tonb-linked susc/raga family outer membrane protein | LY11_00698 | Not Available | Negative | 767700 - 771413 | 137181.0 |
| fecr family protein | LY11_00699 | Not Available | Negative | 771566 - 772753 | 44011.6 |
| glycosyltransferase involved in cell wall biosynthesis | LY11_00700 | Not Available | Positive | 772930 - 774255 | 51505.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_00701 | Not Available | Negative | 774262 - 774681 | 16412.2 |
| hypothetical protein | LY11_00702 | Not Available | Negative | 774639 - 774842 | 8257.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

