Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter cryoconitis strain DSM 14825
Accession NumberQLLR00000000.1
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small conductance mechanosensitive channel | LY11_00013 | Not Available | - | 11891 - 12715 | 30091.9 |
| type iii secretion system (t3ss) sseb-like protein | LY11_00014 | Not Available | - | 12889 - 13599 | 27160.2 |
| superfamily i dna and/or rna helicase | LY11_00015 | Not Available | - | 13949 - 15859 | 71133.0 |
| pimeloyl-acp methyl ester carboxylesterase | LY11_00016 | Not Available | + | 15943 - 16806 | 32330.6 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 16208 - 16307 | Not Available |
| hypothetical protein | LY11_00017 | Not Available | - | 16808 - 17551 | 27176.8 |
| alpha-l-fucosidase | LY11_00018 | Not Available | + | 17711 - 19666 | 72356.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_00019 | Not Available | - | 19669 - 20262 | 22975.9 |
| uncharacterized protein ydiu (upf0061 family) | LY11_00020 | Not Available | + | 20555 - 22111 | 58519.5 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 22925 - 23314 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.