Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | LY11_00553 | Not Available | Positive | 619822 - 621177 | 52140.1 |
| hydroxymethylglutaryl-coa lyase | LY11_00554 | Not Available | Positive | 621292 - 622158 | 31909.3 |
| putative gnat family n-acyltransferase | LY11_00555 | Not Available | Negative | 622179 - 622601 | 15957.0 |
| low affinity fe/cu permease | LY11_00556 | Not Available | Negative | 622579 - 623067 | 17883.6 |
| fructose-bisphosphate aldolase | LY11_00557 | Not Available | Negative | 623192 - 624271 | 39527.8 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | LY11_00558 | Not Available | Positive | 624515 - 625360 | 31205.1 |
| putative alpha-1,2-mannosidase | LY11_00559 | Not Available | Negative | 625519 - 627813 | 85990.4 |
| basic secretory peptidase family protein | LY11_00560 | Not Available | Negative | 627849 - 628544 | 26518.7 |
| hypothetical protein | LY11_00561 | Not Available | Negative | 628765 - 628971 | 7548.35 |
| acetyltransferase (gnat) family protein | LY11_00562 | Not Available | Negative | 629074 - 629604 | 20849.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

