Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 1734 - 1845 | Not Available |
| hypothetical protein | LY11_00004 | Not Available | Negative | 2292 - 2729 | 16845.3 |
| hypothetical protein | LY11_00005 | Not Available | Negative | 2904 - 3350 | 16357.5 |
| sugar/nucleoside kinase (ribokinase family) | LY11_00006 | Not Available | Negative | 4534 - 5409 | 31855.1 |
| uncharacterized protein duf4268 | LY11_00007 | Not Available | Negative | 5491 - 5952 | 18227.6 |
| stearoyl-coa desaturase (delta-9 desaturase) | LY11_00008 | Not Available | Negative | 5984 - 7072 | 42217.8 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | LY11_00009 | Not Available | Positive | 7285 - 9546 | 82356.2 |
| hypothetical protein | LY11_00010 | Not Available | Positive | 9972 - 10106 | 5042.06 |
| cysteine synthase b | LY11_00011 | Not Available | Negative | 10183 - 11055 | 31589.9 |
| serine o-acetyltransferase | LY11_00012 | Not Available | Negative | 11058 - 11870 | 30068.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

