Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase-like protein | LY11_05258 | Not Available | Negative | 6020018 - 6020334 | 12255.6 |
| antimicrobial peptide system sdpb family protein | LY11_05259 | Not Available | Negative | 6020632 - 6021600 | 37541.7 |
| antimicrobial peptide system sdpa family protein | LY11_05260 | Not Available | Negative | 6021554 - 6022006 | 17659.7 |
| sdpc family antimicrobial peptide | LY11_05261 | Not Available | Negative | 6022148 - 6022933 | 29110.0 |
| hypothetical protein | LY11_05262 | Not Available | Negative | 6022981 - 6023373 | 15239.3 |
| hypothetical protein | LY11_05263 | Not Available | Positive | 6023602 - 6024876 | 46630.9 |
| sdpc family antimicrobial peptide | LY11_05264 | Not Available | Positive | 6025013 - 6025621 | 22843.8 |
| antimicrobial peptide system sdpb family protein | LY11_05265 | Not Available | Negative | 6025630 - 6026595 | 37540.8 |
| istb-like atp binding protein | LY11_05266 | Not Available | Negative | 6026767 - 6027000 | 8996.78 |
| integrase-like protein | LY11_05267 | Not Available | Positive | 6027001 - 6027303 | 11771.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

