Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette subfamily b protein | LY11_05057 | Not Available | Negative | 5801098 - 5803308 | 83910.3 |
| lanthionine synthetase-like protein | LY11_05058 | Not Available | Negative | 5803308 - 5804531 | 46702.4 |
| thiopeptide-type bacteriocin biosynthesis protein | LY11_05059 | Not Available | Negative | 5804521 - 5807604 | 120877.0 |
| hypothetical protein | LY11_05060 | Not Available | Negative | 5807694 - 5807849 | 5580.84 |
| hypothetical protein | LY11_05061 | Not Available | Negative | 5807923 - 5808951 | 40176.5 |
| outer membrane receptor protein involved in fe transport | LY11_05062 | Not Available | Negative | 5808954 - 5811413 | 93115.8 |
| uncharacterized protein (tigr02284 family) | LY11_05063 | Not Available | Positive | 5811841 - 5812296 | 16713.6 |
| endonuclease-8 | LY11_05064 | Not Available | Positive | 5812322 - 5813056 | 28253.5 |
| l,d-transpeptidase-like protein | LY11_05065 | Not Available | Positive | 5813134 - 5814666 | 58439.8 |
| rimj/riml family protein n-acetyltransferase | LY11_05066 | Not Available | Negative | 5814722 - 5815237 | 19849.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

