Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | LY11_00442 | Not Available | Positive | 501112 - 502248 | 41707.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | LY11_00443 | Not Available | Positive | 502339 - 503601 | 45434.5 |
| chorismate synthase | LY11_00444 | Not Available | Positive | 503632 - 504723 | 38805.2 |
| subtilase family protein | LY11_00445 | Not Available | Positive | 504890 - 506473 | 56265.8 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase e1 component | LY11_00446 | Not Available | Negative | 506544 - 508967 | 89814.4 |
| uncharacterized protein duf1573 | LY11_00447 | Not Available | Positive | 509185 - 509571 | 13840.0 |
| aspartate aminotransferase | LY11_00448 | Not Available | Positive | 509667 - 510836 | 43242.7 |
| hypothetical protein | LY11_00449 | Not Available | Negative | 510908 - 512332 | 53789.1 |
| hypothetical protein | LY11_00450 | Not Available | Negative | 512395 - 512991 | 22284.4 |
| hypothetical protein | LY11_00451 | Not Available | Negative | 513043 - 513423 | 14828.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

