Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan 2,3-dioxygenase | LY11_04956 | Not Available | Positive | 5673335 - 5674294 | 37606.2 |
| branched-chain amino acid aminotransferase | LY11_04957 | Not Available | Positive | 5674422 - 5675486 | 39117.6 |
| heat shock protein hslj | LY11_04958 | Not Available | Positive | 5675511 - 5676332 | 31175.5 |
| dipeptidyl-peptidase-4 | LY11_04959 | Not Available | Positive | 5676468 - 5678588 | 80815.1 |
| hypothetical protein | LY11_04960 | Not Available | Negative | 5678641 - 5680422 | 67770.8 |
| hypothetical protein | LY11_04961 | Not Available | Negative | 5680482 - 5682260 | 66588.8 |
| pp_04894 | LY11_04962 | Not Available | Positive | 5682445 - 5683878 | Not Available |
| regulatory fis family protein | LY11_04963 | Not Available | Positive | 5683915 - 5685150 | 46272.3 |
| lipopolysaccharide assembly protein | LY11_04964 | Not Available | Positive | 5685154 - 5685663 | 18911.8 |
| hypothetical protein | LY11_04965 | Not Available | Positive | 5685720 - 5686811 | 41932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

