Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hae1 family hydrophobic/amphiphilic exporter-1 | LY11_04916 | Not Available | Negative | 5626002 - 5629175 | 113906.0 |
| membrane fusion protein (multidrug efflux system) | LY11_04917 | Not Available | Negative | 5629198 - 5630355 | 40701.9 |
| outer membrane protein tolc | LY11_04918 | Not Available | Negative | 5630361 - 5631749 | 52364.2 |
| tetr family transcriptional regulator | LY11_04919 | Not Available | Negative | 5631751 - 5632335 | 22098.5 |
| tonb-dependent receptor-like protein | LY11_04920 | Not Available | Negative | 5632484 - 5635765 | 119003.0 |
| dihydrolipoamide dehydrogenase | LY11_04921 | Not Available | Positive | 5636112 - 5637500 | 48747.2 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | LY11_04922 | Not Available | Positive | 5637584 - 5638423 | 31770.0 |
| putative transcriptional regulator | LY11_04923 | Not Available | Negative | 5638455 - 5638667 | 7636.73 |
| rna polymerase primary sigma factor | LY11_04924 | Not Available | Positive | 5639128 - 5639988 | 32664.1 |
| glyceraldehyde 3-phosphate dehydrogenase | LY11_04925 | Not Available | Positive | 5640106 - 5641554 | 53687.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

