Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had superfamily hydrolase (tigr01509 family)/had superfamily hydrolase (tigr01549 family) | LY11_04906 | Not Available | Negative | 5618571 - 5619236 | 25156.3 |
| hypothetical protein | LY11_04907 | Not Available | Negative | 5619245 - 5620570 | 48484.4 |
| dihydrodipicolinate reductase | LY11_04908 | Not Available | Positive | 5620718 - 5621539 | 29194.4 |
| beta-lactamase class d | LY11_04909 | Not Available | Positive | 5621555 - 5622373 | 31338.2 |
| spfh domain/band 7 family protein | LY11_04910 | Not Available | Positive | 5622485 - 5623339 | 31610.8 |
| hypothetical protein | LY11_04911 | Not Available | Positive | 5623342 - 5623524 | 6828.21 |
| dinb family protein | LY11_04912 | Not Available | Positive | 5623540 - 5623983 | 17102.5 |
| istb-like atp binding protein | LY11_04913 | Not Available | Negative | 5624157 - 5624393 | 8626.23 |
| mutator family transposase | LY11_04914 | Not Available | Positive | 5624394 - 5624808 | 16107.5 |
| putative transposase/invertase (tigr01784 family) | LY11_04915 | Not Available | Negative | 5624931 - 5625845 | 35381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

