Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | LY11_04856 | Not Available | Positive | 5567125 - 5570166 | 110346.0 |
| susd-like starch-binding protein associating with outer membrane | LY11_04857 | Not Available | Positive | 5570182 - 5571699 | 56083.4 |
| hypothetical protein | LY11_04858 | Not Available | Positive | 5571699 - 5572622 | 32903.8 |
| mannan endo-1,4-beta-mannosidase | LY11_04859 | Not Available | Positive | 5572650 - 5573684 | 38868.7 |
| cellulase (glycosyl hydrolase family 5) | LY11_04860 | Not Available | Positive | 5573725 - 5575374 | 63581.4 |
| mannobiose 2-epimerase | LY11_04861 | Not Available | Positive | 5575371 - 5576588 | 46532.7 |
| arac-like dna-binding protein | LY11_04862 | Not Available | Positive | 5576549 - 5576953 | 15582.9 |
| hypothetical protein | LY11_04863 | Not Available | Negative | 5577019 - 5577705 | 24919.1 |
| hypothetical protein | LY11_04864 | Not Available | Positive | 5577949 - 5578164 | 8217.77 |
| pare-like toxin of type ii parde toxin-antitoxin system | LY11_04865 | Not Available | Positive | 5578167 - 5578454 | 11081.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

