Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc protease | LY11_04816 | Not Available | Negative | 5518706 - 5521561 | 105439.0 |
| glucosamine-6-phosphate deaminase | LY11_04817 | Not Available | Negative | 5521667 - 5523586 | 72545.6 |
| abc-2 type transport system atp-binding protein | LY11_04818 | Not Available | Negative | 5524083 - 5524811 | 27569.3 |
| hypothetical protein | LY11_04819 | Not Available | Negative | 5524786 - 5526261 | 55903.4 |
| hypothetical protein | LY11_04820 | Not Available | Positive | 5526405 - 5526620 | 8166.89 |
| carboxyl-terminal processing protease | LY11_04821 | Not Available | Positive | 5526654 - 5528357 | 62777.7 |
| 2fe-2s ferredoxin | LY11_04822 | Not Available | Negative | 5528354 - 5528683 | 11923.3 |
| thioredoxin reductase (nadph) | LY11_04823 | Not Available | Negative | 5528687 - 5529697 | 36672.4 |
| udp-2,3-diacylglucosamine hydrolase | LY11_04824 | Not Available | Positive | 5529901 - 5530656 | 29074.7 |
| peptide chain release factor 1 | LY11_04825 | Not Available | Positive | 5530882 - 5531955 | 40529.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

