Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_00422 | Not Available | Negative | 482520 - 482921 | 15033.9 |
| integrase-like protein | LY11_00423 | Not Available | Negative | 483311 - 484993 | 64843.7 |
| Trna-met | Not Available | Not Available | Positive | 485180 - 485253 | Not Available |
| putative hydrolase of the had superfamily | LY11_00425 | Not Available | Positive | 485320 - 485958 | 24293.0 |
| hypothetical protein | LY11_00426 | Not Available | Positive | 485959 - 486294 | 13058.0 |
| catalase | LY11_00427 | Not Available | Positive | 486410 - 487918 | 57526.7 |
| l-proline dehydrogenase | LY11_00428 | Not Available | Negative | 488124 - 489308 | 44422.2 |
| ribosome-associated protein | LY11_00429 | Not Available | Positive | 489404 - 489610 | 7554.33 |
| 3-dehydroquinate synthase | LY11_00430 | Not Available | Positive | 489610 - 490677 | 39622.4 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | LY11_00431 | Not Available | Positive | 490667 - 491578 | 35429.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

