Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-related protein | LY11_04775 | Not Available | Negative | 5476950 - 5477384 | 16428.7 |
| signal transduction histidine kinase | LY11_04776 | Not Available | Negative | 5477458 - 5478747 | 49961.0 |
| dna-binding response ompr family regulator | LY11_04777 | Not Available | Negative | 5478744 - 5479421 | 25828.8 |
| dna-(apurinic or apyrimidinic site) lyase | LY11_04778 | Not Available | Positive | 5479606 - 5480385 | 29920.5 |
| transposase-like protein | LY11_04779 | Not Available | Positive | 5480499 - 5481614 | 42589.0 |
| lrp/asnc family transcriptional regulator for asna, asnc and gida | LY11_04781 | Not Available | Negative | 5482402 - 5482878 | 17998.0 |
| Trna-pseudo | Not Available | Not Available | Positive | 5483033 - 5483143 | Not Available |
| 1-phosphatidylinositol phosphodiesterase | LY11_04783 | Not Available | Positive | 5483487 - 5484473 | 36068.6 |
| hypothetical protein | LY11_04784 | Not Available | Positive | 5484551 - 5484997 | 16815.4 |
| anthranilate synthase component 1 | LY11_04785 | Not Available | Positive | 5485213 - 5486625 | 53582.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

