Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine967-c5)-methyltransferase | LY11_04715 | Not Available | Negative | 5419021 - 5420187 | 45211.7 |
| abc-type branched-subunit amino acid transport system substrate-binding protein | LY11_04716 | Not Available | Negative | 5420222 - 5421457 | 46309.9 |
| gmp synthase (glutamine-hydrolysing) | LY11_04717 | Not Available | Negative | 5421414 - 5422943 | 56312.5 |
| dcmp deaminase | LY11_04718 | Not Available | Negative | 5422952 - 5423404 | 16290.3 |
| fhs family l-fucose permease-like mfs transporter | LY11_04719 | Not Available | Negative | 5423409 - 5425016 | 57383.3 |
| threonine/homoserine/homoserine lactone efflux protein | LY11_04720 | Not Available | Positive | 5425233 - 5425859 | 23385.6 |
| amidophosphoribosyltransferase | LY11_04721 | Not Available | Negative | 5425938 - 5427839 | 71696.8 |
| transposase | LY11_04722 | Not Available | Positive | 5428406 - 5428645 | 9240.07 |
| putative transposase | LY11_04723 | Not Available | Negative | 5428646 - 5428830 | 7301.06 |
| putative transposase | LY11_04724 | Not Available | Negative | 5428842 - 5429108 | 10165.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

