Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | LY11_04594 | Not Available | Negative | 5267082 - 5270375 | 119028.0 |
| fecr family protein | LY11_04595 | Not Available | Negative | 5270468 - 5271487 | 37998.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_04596 | Not Available | Negative | 5271598 - 5272290 | 27102.1 |
| peroxiredoxin | LY11_04597 | Not Available | Negative | 5272325 - 5273458 | 40934.4 |
| glutaryl-coa dehydrogenase | LY11_04598 | Not Available | Negative | 5273571 - 5274932 | 50128.8 |
| bacillithiol biosynthesis deacetylase bshb1 | LY11_04599 | Not Available | Negative | 5275052 - 5275786 | 27259.6 |
| glutathione peroxidase | LY11_04600 | Not Available | Negative | 5275825 - 5276322 | 18968.9 |
| uncharacterized protein duf4294 | LY11_04601 | Not Available | Negative | 5276325 - 5276945 | 23625.7 |
| gtp pyrophosphokinase | LY11_04602 | Not Available | Positive | 5277056 - 5279263 | 83449.0 |
| fur family ferric uptake transcriptional regulator | LY11_04603 | Not Available | Positive | 5279407 - 5279895 | 18988.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

