Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein c (pspc) family protein | LY11_04483 | Not Available | Negative | 5143818 - 5144468 | 24331.4 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | LY11_04484 | Not Available | Positive | 5144788 - 5145522 | 26081.7 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | LY11_04485 | Not Available | Positive | 5145519 - 5146271 | 28187.2 |
| 23s rrna (cytosine1962-c5)-methyltransferase | LY11_04486 | Not Available | Positive | 5146294 - 5147181 | 33799.5 |
| heme-binding hmuy-like protein | LY11_04487 | Not Available | Negative | 5147211 - 5148356 | 41412.2 |
| hypothetical protein | LY11_04488 | Not Available | Positive | 5148572 - 5149624 | 39696.7 |
| hupe/urej protein | LY11_04489 | Not Available | Positive | 5149794 - 5150384 | 22126.7 |
| topoisomerase-4 subunit a | LY11_04490 | Not Available | Negative | 5150381 - 5153599 | 119883.0 |
| cytidine deaminase | LY11_04491 | Not Available | Negative | 5153671 - 5154159 | 17843.5 |
| putative transposase/invertase (tigr01784 family) | LY11_04492 | Not Available | Positive | 5154381 - 5155355 | 37675.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

