Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system alkaline phosphatase synthesis response regulator phop | LY11_04473 | Not Available | Negative | 5132031 - 5132738 | 27526.6 |
| phospho-acceptor domain-containing protein | LY11_04474 | Not Available | Negative | 5132744 - 5133580 | 31147.0 |
| glutamate-1-semialdehyde 2,1-aminomutase | LY11_04475 | Not Available | Negative | 5133671 - 5135041 | 49794.9 |
| porphobilinogen synthase | LY11_04476 | Not Available | Negative | 5135046 - 5136014 | 35998.3 |
| hydroxymethylbilane synthase | LY11_04477 | Not Available | Negative | 5136031 - 5137611 | 59083.9 |
| glutamyl-trna reductase | LY11_04478 | Not Available | Negative | 5137781 - 5139007 | 46851.0 |
| alpha-beta hydrolase superfamily lysophospholipase | LY11_04479 | Not Available | Positive | 5139181 - 5140017 | 30964.7 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | LY11_04480 | Not Available | Negative | 5140056 - 5142182 | 79078.2 |
| putative rdd family membrane protein yckc | LY11_04481 | Not Available | Negative | 5142227 - 5142835 | 22725.0 |
| hypothetical protein | LY11_04482 | Not Available | Negative | 5142842 - 5143795 | 35141.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

