Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-beta-d-heptose 7-phosphate kinase/d-beta-d-heptose 1-phosphate adenosyltransferase | LY11_04453 | Not Available | Positive | 5115889 - 5116872 | 35447.9 |
| d-sedoheptulose 7-phosphate isomerase | LY11_04454 | Not Available | Positive | 5116872 - 5117426 | 19727.8 |
| rfae bifunctional protein nucleotidyltransferase chain/domain | LY11_04455 | Not Available | Positive | 5117437 - 5117928 | 17666.4 |
| heptosyltransferase-2 | LY11_04456 | Not Available | Positive | 5117940 - 5118920 | 37012.4 |
| phosphohistidine phosphatase | LY11_04457 | Not Available | Positive | 5118932 - 5119435 | 18817.2 |
| amp nucleosidase | LY11_04458 | Not Available | Negative | 5119432 - 5120295 | 31991.9 |
| atp-dependent clp protease atp-binding subunit clpx | LY11_04459 | Not Available | Negative | 5120431 - 5121672 | 45872.7 |
| atp-dependent clp protease protease subunit | LY11_04460 | Not Available | Negative | 5121676 - 5122365 | 25598.7 |
| trigger factor | LY11_04461 | Not Available | Negative | 5122615 - 5123970 | 51317.9 |
| hypothetical protein | LY11_04462 | Not Available | Negative | 5124664 - 5124903 | 9381.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

