Pedobacter cryoconitis strain DSM 14825

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter cryoconitis strain DSM 14825 is a bacterial species notable for its motility, attributed to the presence of flagella. This trait enables the bacterium to navigate its environment effectively, which is a significant characteristic for its survival and adaptability. The strain is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and metabolic processes. The genomic data for Pedobacter cryoconitis strain DSM 14825 can be accessed through the sequence accession number QLLR00000000.1, which provides a resource for further molecular studies and comparisons with related species. In terms of ecological significance, species within the Pedobacter genus are often associated with diverse environments, including cold habitats. The motility provided by flagella may enhance the organism's ability to colonize and thrive in such niches, potentially influencing nutrient cycling and microbial community dynamics in those ecosystems. Thus, Pedobacter cryoconitis strain DSM 14825 exemplifies the adaptation of microorganisms to specific environmental conditions, highlighting the intricate relationships between microbial motility, ecological roles, and environmental adaptation.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter cryoconitis
Strainstrain DSM 14825

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter cryoconitis strain DSM 14825

Gene Summary

Adenine Count

1845608 bp

Thymine Count

1836762 bp

Guanine Count

1187658 bp

Cytosine Count

1204992 bp

Genome Length

6080251 bp

Protein-coding Genes

5224 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (guanosine2251-2'-o)-methyltransferaseLY11_04293Not AvailablePositive4941938 - 494270827904.1
mannose-1-phosphate guanylyltransferaseLY11_04294Not AvailableNegative4942732 - 494379639585.4
arabinose-5-phosphate isomeraseLY11_04295Not AvailableNegative4943836 - 494484035765.8
atp-dependent dna helicase recqLY11_04296Not AvailablePositive4944890 - 494707982295.2
2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase)LY11_04297Not AvailablePositive4947088 - 494790329391.8
outer membrane protein ompa-like peptidoglycan-associated proteinLY11_04298Not AvailableNegative4948016 - 494991770813.5
organic radical activating enzymeLY11_04299Not AvailableNegative4949983 - 495060623406.0
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunitLY11_04300Not AvailablePositive4950705 - 495104912953.5
5,10-methylenetetrahydrofolate dehydrogenase (nadp+)LY11_04301Not AvailableNegative4951118 - 495199931551.5
gtp-binding protein lepaLY11_04302Not AvailableNegative4952030 - 495381767065.4

Displaying genes 4281 – 4290 of 5306 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.