Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine2251-2'-o)-methyltransferase | LY11_04293 | Not Available | Positive | 4941938 - 4942708 | 27904.1 |
| mannose-1-phosphate guanylyltransferase | LY11_04294 | Not Available | Negative | 4942732 - 4943796 | 39585.4 |
| arabinose-5-phosphate isomerase | LY11_04295 | Not Available | Negative | 4943836 - 4944840 | 35765.8 |
| atp-dependent dna helicase recq | LY11_04296 | Not Available | Positive | 4944890 - 4947079 | 82295.2 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | LY11_04297 | Not Available | Positive | 4947088 - 4947903 | 29391.8 |
| outer membrane protein ompa-like peptidoglycan-associated protein | LY11_04298 | Not Available | Negative | 4948016 - 4949917 | 70813.5 |
| organic radical activating enzyme | LY11_04299 | Not Available | Negative | 4949983 - 4950606 | 23406.0 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit | LY11_04300 | Not Available | Positive | 4950705 - 4951049 | 12953.5 |
| 5,10-methylenetetrahydrofolate dehydrogenase (nadp+) | LY11_04301 | Not Available | Negative | 4951118 - 4951999 | 31551.5 |
| gtp-binding protein lepa | LY11_04302 | Not Available | Negative | 4952030 - 4953817 | 67065.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

