Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | LY11_04203 | Not Available | Negative | 4843435 - 4844328 | 32575.4 |
| dna topoisomerase-1 | LY11_04204 | Not Available | Positive | 4844458 - 4845507 | 40014.9 |
| deor family transcriptional regulator | LY11_04205 | Not Available | Negative | 4845517 - 4846266 | 27848.7 |
| 5'(3')-deoxyribonucleotidase | LY11_04206 | Not Available | Positive | 4846355 - 4846906 | 21332.5 |
| hypothetical protein | LY11_04207 | Not Available | Negative | 4846965 - 4847177 | 8160.4 |
| uncharacterized protein ybbc (duf1343 family) | LY11_04208 | Not Available | Negative | 4847195 - 4848451 | 46616.8 |
| lipoprotein-releasing system permease protein | LY11_04209 | Not Available | Positive | 4848557 - 4849777 | 46118.5 |
| prolyl oligopeptidase family protein | LY11_04210 | Not Available | Negative | 4849850 - 4852258 | 89228.6 |
| atp-dependent rna helicase rhle | LY11_04211 | Not Available | Positive | 4852442 - 4853746 | 48451.0 |
| putative transposase/invertase (tigr01784 family) | LY11_04212 | Not Available | Negative | 4853812 - 4854753 | 36176.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

