Pedobacter cryoconitis strain DSM 14825

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter cryoconitis strain DSM 14825 is a bacterial species notable for its motility, attributed to the presence of flagella. This trait enables the bacterium to navigate its environment effectively, which is a significant characteristic for its survival and adaptability. The strain is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and metabolic processes. The genomic data for Pedobacter cryoconitis strain DSM 14825 can be accessed through the sequence accession number QLLR00000000.1, which provides a resource for further molecular studies and comparisons with related species. In terms of ecological significance, species within the Pedobacter genus are often associated with diverse environments, including cold habitats. The motility provided by flagella may enhance the organism's ability to colonize and thrive in such niches, potentially influencing nutrient cycling and microbial community dynamics in those ecosystems. Thus, Pedobacter cryoconitis strain DSM 14825 exemplifies the adaptation of microorganisms to specific environmental conditions, highlighting the intricate relationships between microbial motility, ecological roles, and environmental adaptation.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter cryoconitis
Strainstrain DSM 14825

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter cryoconitis strain DSM 14825

Gene Summary

Adenine Count

1845608 bp

Thymine Count

1836762 bp

Guanine Count

1187658 bp

Cytosine Count

1204992 bp

Genome Length

6080251 bp

Protein-coding Genes

5224 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionyl-trna formyltransferaseLY11_04203Not AvailableNegative4843435 - 484432832575.4
dna topoisomerase-1LY11_04204Not AvailablePositive4844458 - 484550740014.9
deor family transcriptional regulatorLY11_04205Not AvailableNegative4845517 - 484626627848.7
5'(3')-deoxyribonucleotidaseLY11_04206Not AvailablePositive4846355 - 484690621332.5
hypothetical proteinLY11_04207Not AvailableNegative4846965 - 48471778160.4
uncharacterized protein ybbc (duf1343 family)LY11_04208Not AvailableNegative4847195 - 484845146616.8
lipoprotein-releasing system permease proteinLY11_04209Not AvailablePositive4848557 - 484977746118.5
prolyl oligopeptidase family proteinLY11_04210Not AvailableNegative4849850 - 485225889228.6
atp-dependent rna helicase rhleLY11_04211Not AvailablePositive4852442 - 485374648451.0
putative transposase/invertase (tigr01784 family)LY11_04212Not AvailableNegative4853812 - 485475336176.1

Displaying genes 4191 – 4200 of 5306 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.