Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-methylcytosine-specific restriction protein b | LY11_04169 | Not Available | Positive | 4812860 - 4813078 | 8047.92 |
| hypothetical protein | LY11_04170 | Not Available | Negative | 4813203 - 4813835 | 24501.8 |
| hypothetical protein | LY11_04171 | Not Available | Negative | 4813832 - 4814161 | 12342.5 |
| uncharacterized protein duf4393 | LY11_04196 | Not Available | Negative | 4838490 - 4839278 | 29755.8 |
| hypothetical protein | LY11_04197 | Not Available | Positive | 4839356 - 4839715 | 14200.0 |
| hypothetical protein | LY11_04198 | Not Available | Positive | 4839723 - 4840025 | 12039.4 |
| hypothetical protein | LY11_04199 | Not Available | Positive | 4840028 - 4840255 | 8577.89 |
| 1-aminocyclopropane-1-carboxylate deaminase | LY11_04200 | Not Available | Negative | 4840500 - 4841378 | 32012.9 |
| 23s rrna pseudouridine1911/1915/1917 synthase | LY11_04201 | Not Available | Positive | 4841551 - 4842579 | 38990.6 |
| branched-chain amino acid aminotransferase | LY11_04202 | Not Available | Positive | 4842587 - 4843426 | 31432.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

