Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | LY11_04129 | Not Available | Negative | 4758497 - 4759354 | 30948.7 |
| uncharacterized protein duf1599 | LY11_04130 | Not Available | Positive | 4759481 - 4760023 | 20557.1 |
| putative membrane protein ypha (doxx/surf4 family) | LY11_04131 | Not Available | Positive | 4760054 - 4761205 | 42958.8 |
| peptide/nickel transport system permease protein | LY11_04132 | Not Available | Positive | 4761211 - 4762269 | 39219.6 |
| shikimate kinase | LY11_04133 | Not Available | Positive | 4762269 - 4762775 | 18574.4 |
| acyl-coa hydrolase | LY11_04134 | Not Available | Negative | 4762772 - 4763170 | 14960.0 |
| trna pseudouridine38-40 synthase | LY11_04135 | Not Available | Negative | 4763237 - 4764046 | 31202.8 |
| hexosaminidase | LY11_04136 | Not Available | Negative | 4764051 - 4765955 | 71566.7 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | LY11_04137 | Not Available | Negative | 4766112 - 4767509 | 50171.1 |
| aspartate-semialdehyde dehydrogenase | LY11_04138 | Not Available | Negative | 4767629 - 4768621 | 36559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

