Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_04109 | Not Available | Negative | 4733780 - 4735120 | 50436.2 |
| phosphonatase-like hydrolase | LY11_04110 | Not Available | Negative | 4735122 - 4735811 | 24943.4 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LY11_04111 | Not Available | Positive | 4735922 - 4737319 | 52233.9 |
| thioredoxin reductase (nadph) | LY11_04112 | Not Available | Positive | 4737363 - 4739024 | 60686.1 |
| phospholipase c | LY11_04113 | Not Available | Positive | 4739261 - 4741642 | 88774.5 |
| phospho-acceptor domain-containing protein | LY11_04114 | Not Available | Negative | 4741647 - 4742858 | 45358.9 |
| chitinase class i | LY11_04115 | Not Available | Positive | 4743191 - 4744174 | 36284.3 |
| gh3 auxin-responsive promoter | LY11_04116 | Not Available | Negative | 4744171 - 4745685 | 58351.5 |
| lipopolysaccharide export system atp-binding protein | LY11_04117 | Not Available | Negative | 4745694 - 4746428 | 27373.2 |
| single-stranded-dna-specific exonuclease | LY11_04118 | Not Available | Negative | 4746425 - 4748140 | 63298.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

