Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nusa antitermination factor | LY11_04089 | Not Available | Negative | 4717962 - 4719197 | 46796.8 |
| ribosome maturation factor rimp | LY11_04090 | Not Available | Negative | 4719200 - 4719664 | 17196.9 |
| hypothetical protein | LY11_04091 | Not Available | Negative | 4719871 - 4720305 | 15599.0 |
| putative membrane protein | LY11_04092 | Not Available | Positive | 4720324 - 4720671 | 12109.7 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | LY11_04093 | Not Available | Negative | 4720736 - 4721875 | 41532.9 |
| l-aspartate 1-decarboxylase | LY11_04094 | Not Available | Negative | 4721966 - 4722316 | 12850.6 |
| pantoate--beta-alanine ligase | LY11_04095 | Not Available | Negative | 4722361 - 4723227 | 32286.4 |
| starch synthase | LY11_04096 | Not Available | Positive | 4723353 - 4724177 | 31677.0 |
| uncharacterized protein duf4270 | LY11_04097 | Not Available | Positive | 4724201 - 4725688 | 52400.5 |
| integrase-like protein | LY11_04098 | Not Available | Positive | 4726076 - 4726369 | 11349.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

