Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | LY11_03989 | Not Available | Positive | 4609585 - 4610157 | 22176.0 |
| regulatory luxr family protein | LY11_03990 | Not Available | Positive | 4610164 - 4611111 | 37127.3 |
| mekhla domain-containing protein | LY11_03991 | Not Available | Negative | 4611115 - 4611594 | 18705.1 |
| acetolactate synthase-1/2/3 large subunit | LY11_03992 | Not Available | Negative | 4611594 - 4613333 | 63845.7 |
| small multidrug resistance family-3 protein | LY11_03993 | Not Available | Negative | 4613563 - 4613898 | 12329.4 |
| hypothetical protein | LY11_03994 | Not Available | Negative | 4613885 - 4614223 | 13251.0 |
| peptidoglycan/lps o-acetylase oafa/yrhl | LY11_03995 | Not Available | Negative | 4614281 - 4615432 | 44005.1 |
| pyruvate,water dikinase | LY11_03996 | Not Available | Negative | 4615580 - 4618231 | 98124.7 |
| hypothetical protein | LY11_03997 | Not Available | Positive | 4618314 - 4618586 | 10288.8 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LY11_03998 | Not Available | Positive | 4618774 - 4619499 | 26050.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

