Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | LY11_03949 | Not Available | Positive | 4557622 - 4558836 | 46080.0 |
| hlyd family secretion protein | LY11_03950 | Not Available | Positive | 4558919 - 4559842 | 33176.2 |
| czca family heavy metal efflux pump | LY11_03951 | Not Available | Positive | 4559842 - 4562862 | 110776.0 |
| yvtn family beta-propeller protein | LY11_03952 | Not Available | Negative | 4562975 - 4564009 | 36922.9 |
| cubico group peptidase (beta-lactamase class c family) | LY11_03953 | Not Available | Positive | 4564208 - 4565776 | 58858.2 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | LY11_03954 | Not Available | Negative | 4565812 - 4566627 | 31576.9 |
| abc-type lipoprotein release transport system permease subunit | LY11_03955 | Not Available | Positive | 4566924 - 4569299 | 88823.0 |
| hypothetical protein | LY11_03956 | Not Available | Negative | 4569423 - 4570580 | 44281.7 |
| hypothetical protein | LY11_03957 | Not Available | Negative | 4570591 - 4571484 | 34883.1 |
| type vi secretion system (t6ss) vasb/imph family protein | LY11_03958 | Not Available | Positive | 4571602 - 4572540 | 35297.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

